Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830656.1_cds_XP_016504262.1_17722
CDS Infomation

[gene=LOC107822253] [db_xref=GeneID:107822253] [protein=protein LONGIFOLIA 1-like] [protein_id=XP_016504262.1] [location=join(97731..97850,97943..99463,99563..99752,100107..100711)] [gbkey=CDS]
Sequence

ATGGACGGTGTGGATGATAGGAGAATGGGTTGTATGGCTGGATTTCTTCAGATCTTTGAC
CGCAATCACATTTTAGCTGGGAAGAGACTTTATGCCACCAAACGCTTGCCACATTTCGCG
GTTGTTGATGATGCGTCAGAGCCCGATGATAAGTTTGTCGCATCACCGGCAGTTTCAAAG
GAGCTAGGGAAACCACAGCTTGCAAGACCTGGAGAAACACCAAGTCCAGACCGATCCAAG
CAGCCACCAGCAGAGGTCAGCCCTGTCGAGCCAGCTGTTTCTGTCCTGGTAGAGACACCG
CCAAAATCACCACTCCCTCTTCCTATATTTGAAGTGAAAGATGGGACGAGGTCTTCGTGG
AAGTTTTGCAAAGAAGCTCCGAGGCTCTCACTGGACAGCAGAGCTGTTATTGATGCTAAA
GGAAGTCTTCGGCCGAGGGAGCTACGAACAAAGTCTTCAACTCTATCAGCAAACAGAGGT
GAGAACACAGAGGACGGAGCTGATGGTGACGACAATCAGCGTCCTTGCCCGAGTGTCATT
GCTCGGCTAATGGGACTTGAACCATTACCCCACTCAAGCCCAGAAGCTCTGCCGCAAGCA
GAGCTGCGAAGATCTGCATCAGAATCCAGAGTCTCAAGAGACTTGTTTAATGGTCGTTTT
GTGGACAGAAACCATGTGGATTTGAAAGAGCTAAACCATCCTCGATCTAACATATCAAAC
AATGCAATGAAAGACAATGCAGCGAATGAACGTAGAAGCTCAATGTCAAATGCCAGACCC
ATGGACCGGATGGGATATCCTCTGAAGAACGAGAAGATTGAAAGACCAAAGGCTTCGAAC
AGACGTTTAAATTCATCACCGTGGAAGTCACCTCAACACAGAAAGTGTTTCTTTGATACA
GCAGACATTTTTCCAGAGCCAAAGCAAACAGTCTCACTCTATTGTGAGATAGACAAGAGA
TTGAAGATGAGAGGAATTGATGAGCCTTCTAAAGATCTTGAGACCTTGAAGCAAATCCTT
GAGGCTTTGCAACTCAAAGGGCTCCTACATACCAAAAGACCATCGGAGCAGATTGGCCAC
CGGAATTTTGTATACGACCCAACTTACTCATCTGATGAGTCCCCAATAGTCCTCATGAGG
CCTTCAAGATCAGTTTCACCAAGCCAGAGAAGAATGGCAAATGTTACACCCCCATCAAAT
ATGAGAAGCCGAAATGTCATTGGTCGGAGACCTAATCTCTCCAGTGAAAGTCTTCCATCG
GTGAGCCCATATCGGGAACGACCTGCTTCTGAACGAAATGCTCGGAGTCCACTAAGAGCT
AGAGATTCCGGCTCGCCAACCCAAAGAGAAAACAGTGTGAGGCTTTCCAACTCTGTGGCC
AAACCAAAGAACTTGAATGTTGAGACTCGTAGAAGAGCAGGAGAGCCAATTGAGAATCGA
AGAGGTTCTCCAGTACAATCACCAAAGCTTAGCTCGAGGAGAGGCAGTTTGGAGCAAAAT
GTCACAAAGGGATCACCTAGAAACAAGAGAGAAATGGCAGAGATTAAGCAGAAAGAGAAG
ATCACAACCTTTGTTACAGAGGACGAGTCATCGTCCATTTCTGAAAGCACTGTTAGCTCA
TCTTTACAAACTGATGCGGAGAGATCTAATTTGGAGGATTACAATGAAGGAAGGAGCCTT
TTGGAAAGGTGCGATAAGCTGCTTAATAGCATAGCAGAGATGAATGCCCCTGAATCACAA
CCGAGTCCGGTGTCAGTTCTTGACTCGTCGTTCTACAGGGACGACTCACCTTCCCCTTCT
CCTATCATGAAAAGGAACATCGATTTCAAAGATGTTTCAGGGGAATCGGAGGAAGAAATA
TGGATCTCGGCACTTTCACCTGTCCGATCAAAGTATGAAGATTCAACGGATGACTCTCTT
CTTAGTTACATTTCAGACATCCTTAGAGCTTCCCAATATCTGCCTGAGGAATCTGATATA
TTTTTATTATTGGAGAAGCAGCAATATCTCAAAGGAAAGGACACTTCCAAAGTCTCCATA
CTCGAAAGAAAGCTGATCTTTGACACTATCACTGAAATTCTTGATAGAAACAGGCAACTT
CCCCCTTGGAAAGCATTCTCCTGGTCAGGTTCATCTATCGCAAAGCCATCAGTGGAGAAT
GTTTGGACCGAGTTCCAAAGAANTGAGTTCCAAAAAATCCAAGAACGTGAAAGTGGTAAC
AACTTGGTCGAGATCATTTGTGAAGTTCTCAAGAAAGACCTGGCTCAAGACACAGTCAAT
GGTTGGGGAGACTGTCTGGTGGAGGTGTCCGAGGCGGTCTTGGACATGGAAAGGCAGATA
TTCAAGGATTTAATAGTCGAAACGATCCAAGACCTTGCTGAGTTCGGCTGCAAAACGACC
CTCTTAACAGCCCTGTGTAGGAAGTTAGTTTTCTAA

Peptide Sequence

PEP ID

XP_016504262.1
PEP Infomation

PREDICTED: protein LONGIFOLIA 1-like [Nicotiana tabacum]
Sequence

MDGVDDRRMGCMAGFLQIFDRNHILAGKRLYATKRLPHFAVVDDASEPDDKFVASPAVSK
ELGKPQLARPGETPSPDRSKQPPAEVSPVEPAVSVLVETPPKSPLPLPIFEVKDGTRSSW
KFCKEAPRLSLDSRAVIDAKGSLRPRELRTKSSTLSANRGENTEDGADGDDNQRPCPSVI
ARLMGLEPLPHSSPEALPQAELRRSASESRVSRDLFNGRFVDRNHVDLKELNHPRSNISN
NAMKDNAANERRSSMSNARPMDRMGYPLKNEKIERPKASNRRLNSSPWKSPQHRKCFFDT
ADIFPEPKQTVSLYCEIDKRLKMRGIDEPSKDLETLKQILEALQLKGLLHTKRPSEQIGH
RNFVYDPTYSSDESPIVLMRPSRSVSPSQRRMANVTPPSNMRSRNVIGRRPNLSSESLPS
VSPYRERPASERNARSPLRARDSGSPTQRENSVRLSNSVAKPKNLNVETRRRAGEPIENR
RGSPVQSPKLSSRRGSLEQNVTKGSPRNKREMAEIKQKEKITTFVTEDESSSISESTVSS
SLQTDAERSNLEDYNEGRSLLERCDKLLNSIAEMNAPESQPSPVSVLDSSFYRDDSPSPS
PIMKRNIDFKDVSGESEEEIWISALSPVRSKYEDSTDDSLLSYISDILRASQYLPEESDI
FLLLEKQQYLKGKDTSKVSILERKLIFDTITEILDRNRQLPPWKAFSWSGSSIAKPSVEN
VWTEFQRXEFQKIQERESGNNLVEIICEVLKKDLAQDTVNGWGDCLVEVSEAVLDMERQI
FKDLIVETIQDLAEFGCKTTLLTALCRKLVF

Transcript Sequence

Gene sequence data has not been registered.